Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav13n-4A0A0G2JG01 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav13n-4A0A0G2JG01 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav13n-4A0A0G2JG01 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav13n-4A0A0G2JG01 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav13n-4A0A0G2JG01 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav13n-4A0A0G2JG01 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav13n-4A0A0G2JG01 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
Trav13n-4A0A0G2JG01 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trav13n-4A0A0G2JG01 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav13n-4A0A0G2JG01 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.51■□□□□ 0.39
Trav13n-4A0A0G2JG01 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.51■□□□□ 0.39
Trav13n-4A0A0G2JG01 Terc-201ENSMUST00000082862 423 ntBASIC17.51■□□□□ 0.39
Trav13n-4A0A0G2JG01 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav13n-4A0A0G2JG01 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav13n-4A0A0G2JG01 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
Trav13n-4A0A0G2JG01 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.5■□□□□ 0.39
Trav13n-4A0A0G2JG01 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav13n-4A0A0G2JG01 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav13n-4A0A0G2JG01 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav13n-4A0A0G2JG01 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13n-4A0A0G2JG01 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav13n-4A0A0G2JG01 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.49■□□□□ 0.39
Trav13n-4A0A0G2JG01 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trav13n-4A0A0G2JG01 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.49■□□□□ 0.39
Trav13n-4A0A0G2JG01 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13n-4A0A0G2JG01 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13n-4A0A0G2JG01 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13n-4A0A0G2JG01 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trav13n-4A0A0G2JG01 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13n-4A0A0G2JG01 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13n-4A0A0G2JG01 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13n-4A0A0G2JG01 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13n-4A0A0G2JG01 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13n-4A0A0G2JG01 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Trav13n-4A0A0G2JG01 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trav13n-4A0A0G2JG01 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13n-4A0A0G2JG01 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13n-4A0A0G2JG01 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13n-4A0A0G2JG01 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav13n-4A0A0G2JG01 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav13n-4A0A0G2JG01 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav13n-4A0A0G2JG01 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav13n-4A0A0G2JG01 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav13n-4A0A0G2JG01 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav13n-4A0A0G2JG01 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav13n-4A0A0G2JG01 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Trav13n-4A0A0G2JG01 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.46■□□□□ 0.39
Trav13n-4A0A0G2JG01 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav13n-4A0A0G2JG01 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13n-4A0A0G2JG01 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav13n-4A0A0G2JG01 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13n-4A0A0G2JG01 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Trav13n-4A0A0G2JG01 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13n-4A0A0G2JG01 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13n-4A0A0G2JG01 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trav13n-4A0A0G2JG01 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13n-4A0A0G2JG01 Gm5921-201ENSMUST00000075898 882 ntBASIC17.44■□□□□ 0.38
Trav13n-4A0A0G2JG01 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13n-4A0A0G2JG01 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13n-4A0A0G2JG01 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13n-4A0A0G2JG01 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.43■□□□□ 0.38
Trav13n-4A0A0G2JG01 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trav13n-4A0A0G2JG01 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13n-4A0A0G2JG01 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13n-4A0A0G2JG01 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13n-4A0A0G2JG01 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav13n-4A0A0G2JG01 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13n-4A0A0G2JG01 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13n-4A0A0G2JG01 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Trav13n-4A0A0G2JG01 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13n-4A0A0G2JG01 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13n-4A0A0G2JG01 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13n-4A0A0G2JG01 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13n-4A0A0G2JG01 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13n-4A0A0G2JG01 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trav13n-4A0A0G2JG01 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13n-4A0A0G2JG01 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav13n-4A0A0G2JG01 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
Trav13n-4A0A0G2JG01 Gm5812-201ENSMUST00000061073 957 ntBASIC17.41■□□□□ 0.38
Trav13n-4A0A0G2JG01 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav13n-4A0A0G2JG01 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav13n-4A0A0G2JG01 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trav13n-4A0A0G2JG01 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trav13n-4A0A0G2JG01 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trav13n-4A0A0G2JG01 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav13n-4A0A0G2JG01 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav13n-4A0A0G2JG01 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.4■□□□□ 0.38
Trav13n-4A0A0G2JG01 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trav13n-4A0A0G2JG01 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav13n-4A0A0G2JG01 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.4■□□□□ 0.38
Trav13n-4A0A0G2JG01 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav13n-4A0A0G2JG01 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav13n-4A0A0G2JG01 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trav13n-4A0A0G2JG01 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav13n-4A0A0G2JG01 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13n-4A0A0G2JG01 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13n-4A0A0G2JG01 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13n-4A0A0G2JG01 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.38■□□□□ 0.37
Trav13n-4A0A0G2JG01 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms