Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav13d-4A0A0G2JFX3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC14.9□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Dmtn-209ENSMUST00000228295 2572 ntBASIC14.9□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Gm13889-201ENSMUST00000099689 1386 ntBASIC14.9□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC14.9□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC14.9□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC14.9□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-4A0A0G2JFX3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Gm8503-201ENSMUST00000118131 455 ntBASIC14.89□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC14.88□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-4A0A0G2JFX3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Gm6277-202ENSMUST00000224036 2779 ntBASIC14.88□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-4A0A0G2JFX3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC14.85□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13d-4A0A0G2JFX3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC14.83□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav13d-4A0A0G2JFX3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Mir3960-201ENSMUST00000198213 73 ntBASIC14.83□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav13d-4A0A0G2JFX3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Gm28731-201ENSMUST00000185564 1569 ntBASIC14.81□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Gm9812-201ENSMUST00000061934 968 ntBASIC14.81□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms