Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.39■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.39■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.38■□□□□ 0.69
Trbv12-1A0A0B4J1H0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.38■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trbv12-1A0A0B4J1H0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.37■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.36■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.36■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.34■□□□□ 0.69
Trbv12-1A0A0B4J1H0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.34■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trbv12-1A0A0B4J1H0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv12-1A0A0B4J1H0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv12-1A0A0B4J1H0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv12-1A0A0B4J1H0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.31■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.31■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.31■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.31■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.3■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.29■□□□□ 0.68
Trbv12-1A0A0B4J1H0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.29■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.28■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv12-1A0A0B4J1H0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.28■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv12-1A0A0B4J1H0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms