Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6d-5A0A075B6B9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6d-5A0A075B6B9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6d-5A0A075B6B9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav6d-5A0A075B6B9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6d-5A0A075B6B9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6d-5A0A075B6B9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6d-5A0A075B6B9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trav6d-5A0A075B6B9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trav6d-5A0A075B6B9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6d-5A0A075B6B9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6d-5A0A075B6B9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Trav6d-5A0A075B6B9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.58■□□□□ 0.41
Trav6d-5A0A075B6B9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav6d-5A0A075B6B9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Trav6d-5A0A075B6B9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.58■□□□□ 0.4
Trav6d-5A0A075B6B9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6d-5A0A075B6B9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6d-5A0A075B6B9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6d-5A0A075B6B9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6d-5A0A075B6B9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Trav6d-5A0A075B6B9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trav6d-5A0A075B6B9 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.57■□□□□ 0.4
Trav6d-5A0A075B6B9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.57■□□□□ 0.4
Trav6d-5A0A075B6B9 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.57■□□□□ 0.4
Trav6d-5A0A075B6B9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6d-5A0A075B6B9 Notumos-201ENSMUST00000151998 2659 ntBASIC17.57■□□□□ 0.4
Trav6d-5A0A075B6B9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6d-5A0A075B6B9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6d-5A0A075B6B9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6d-5A0A075B6B9 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.57■□□□□ 0.4
Trav6d-5A0A075B6B9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.57■□□□□ 0.4
Trav6d-5A0A075B6B9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6d-5A0A075B6B9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6d-5A0A075B6B9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6d-5A0A075B6B9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6d-5A0A075B6B9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Trav6d-5A0A075B6B9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6d-5A0A075B6B9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6d-5A0A075B6B9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.56■□□□□ 0.4
Trav6d-5A0A075B6B9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.56■□□□□ 0.4
Trav6d-5A0A075B6B9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6d-5A0A075B6B9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6d-5A0A075B6B9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6d-5A0A075B6B9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.55■□□□□ 0.4
Trav6d-5A0A075B6B9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6d-5A0A075B6B9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trav6d-5A0A075B6B9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.55■□□□□ 0.4
Trav6d-5A0A075B6B9 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.55■□□□□ 0.4
Trav6d-5A0A075B6B9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trav6d-5A0A075B6B9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6d-5A0A075B6B9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6d-5A0A075B6B9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6d-5A0A075B6B9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.54■□□□□ 0.4
Trav6d-5A0A075B6B9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6d-5A0A075B6B9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6d-5A0A075B6B9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6d-5A0A075B6B9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.54■□□□□ 0.4
Trav6d-5A0A075B6B9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6d-5A0A075B6B9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav6d-5A0A075B6B9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav6d-5A0A075B6B9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6d-5A0A075B6B9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6d-5A0A075B6B9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6d-5A0A075B6B9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6d-5A0A075B6B9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6d-5A0A075B6B9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trav6d-5A0A075B6B9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6d-5A0A075B6B9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6d-5A0A075B6B9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trav6d-5A0A075B6B9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6d-5A0A075B6B9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav6d-5A0A075B6B9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav6d-5A0A075B6B9 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.52■□□□□ 0.39
Trav6d-5A0A075B6B9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav6d-5A0A075B6B9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6d-5A0A075B6B9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6d-5A0A075B6B9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.51■□□□□ 0.39
Trav6d-5A0A075B6B9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6d-5A0A075B6B9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6d-5A0A075B6B9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6d-5A0A075B6B9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6d-5A0A075B6B9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-5A0A075B6B9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.5■□□□□ 0.39
Trav6d-5A0A075B6B9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-5A0A075B6B9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-5A0A075B6B9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-5A0A075B6B9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-5A0A075B6B9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-5A0A075B6B9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-5A0A075B6B9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6d-5A0A075B6B9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6d-5A0A075B6B9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav6d-5A0A075B6B9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6d-5A0A075B6B9 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.49■□□□□ 0.39
Trav6d-5A0A075B6B9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6d-5A0A075B6B9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trav6d-5A0A075B6B9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6d-5A0A075B6B9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6d-5A0A075B6B9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms