Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.1■□□□□ 0.17
Trav6n-6A0A075B6B2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-6A0A075B6B2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-6A0A075B6B2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-6A0A075B6B2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-6A0A075B6B2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-6A0A075B6B2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-6A0A075B6B2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav6n-6A0A075B6B2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav6n-6A0A075B6B2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trav6n-6A0A075B6B2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav6n-6A0A075B6B2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav6n-6A0A075B6B2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav6n-6A0A075B6B2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6n-6A0A075B6B2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6n-6A0A075B6B2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6n-6A0A075B6B2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav6n-6A0A075B6B2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6n-6A0A075B6B2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6n-6A0A075B6B2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6n-6A0A075B6B2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6n-6A0A075B6B2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6n-6A0A075B6B2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.06■□□□□ 0.16
Trav6n-6A0A075B6B2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6n-6A0A075B6B2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav6n-6A0A075B6B2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6n-6A0A075B6B2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.05■□□□□ 0.16
Trav6n-6A0A075B6B2 Gm4799-201ENSMUST00000095396 657 ntBASIC16.05■□□□□ 0.16
Trav6n-6A0A075B6B2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-6A0A075B6B2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-6A0A075B6B2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-6A0A075B6B2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-6A0A075B6B2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-6A0A075B6B2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav6n-6A0A075B6B2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6n-6A0A075B6B2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6n-6A0A075B6B2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6n-6A0A075B6B2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6n-6A0A075B6B2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6n-6A0A075B6B2 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.04■□□□□ 0.16
Trav6n-6A0A075B6B2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6n-6A0A075B6B2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav6n-6A0A075B6B2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6n-6A0A075B6B2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Trav6n-6A0A075B6B2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trav6n-6A0A075B6B2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6n-6A0A075B6B2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trav6n-6A0A075B6B2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6n-6A0A075B6B2 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.02■□□□□ 0.16
Trav6n-6A0A075B6B2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6n-6A0A075B6B2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Trav6n-6A0A075B6B2 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.01■□□□□ 0.15
Trav6n-6A0A075B6B2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-6A0A075B6B2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.01■□□□□ 0.15
Trav6n-6A0A075B6B2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-6A0A075B6B2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-6A0A075B6B2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-6A0A075B6B2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-6A0A075B6B2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-6A0A075B6B2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-6A0A075B6B2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-6A0A075B6B2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-6A0A075B6B2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-6A0A075B6B2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-6A0A075B6B2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-6A0A075B6B2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16■□□□□ 0.15
Trav6n-6A0A075B6B2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-6A0A075B6B2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-6A0A075B6B2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-6A0A075B6B2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trav6n-6A0A075B6B2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav6n-6A0A075B6B2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-6A0A075B6B2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
Trav6n-6A0A075B6B2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-6A0A075B6B2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-6A0A075B6B2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-6A0A075B6B2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-6A0A075B6B2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-6A0A075B6B2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Trav6n-6A0A075B6B2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.98■□□□□ 0.15
Trav6n-6A0A075B6B2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-6A0A075B6B2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-6A0A075B6B2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-6A0A075B6B2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-6A0A075B6B2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav6n-6A0A075B6B2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-6A0A075B6B2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-6A0A075B6B2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.97■□□□□ 0.15
Trav6n-6A0A075B6B2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav6n-6A0A075B6B2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.97■□□□□ 0.15
Trav6n-6A0A075B6B2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-6A0A075B6B2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-6A0A075B6B2 Iqck-206ENSMUST00000208658 2891 ntBASIC15.97■□□□□ 0.15
Trav6n-6A0A075B6B2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-6A0A075B6B2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-6A0A075B6B2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-6A0A075B6B2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav6n-6A0A075B6B2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC15.96■□□□□ 0.15
Trav6n-6A0A075B6B2 AC154454.1-201ENSMUST00000225253 216 ntBASIC15.96■□□□□ 0.15
Trav6n-6A0A075B6B2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms