Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trav6n-7A0A075B6A6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Trav6n-7A0A075B6A6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav6n-7A0A075B6A6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav6n-7A0A075B6A6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav6n-7A0A075B6A6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav6n-7A0A075B6A6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav6n-7A0A075B6A6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav6n-7A0A075B6A6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav6n-7A0A075B6A6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav6n-7A0A075B6A6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6n-7A0A075B6A6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6n-7A0A075B6A6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trav6n-7A0A075B6A6 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.46■□□□□ 0.55
Trav6n-7A0A075B6A6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6n-7A0A075B6A6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6n-7A0A075B6A6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6n-7A0A075B6A6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trav6n-7A0A075B6A6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6n-7A0A075B6A6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.45■□□□□ 0.54
Trav6n-7A0A075B6A6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6n-7A0A075B6A6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.45■□□□□ 0.54
Trav6n-7A0A075B6A6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6n-7A0A075B6A6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6n-7A0A075B6A6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6n-7A0A075B6A6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trav6n-7A0A075B6A6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6n-7A0A075B6A6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6n-7A0A075B6A6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6n-7A0A075B6A6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6n-7A0A075B6A6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6n-7A0A075B6A6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6n-7A0A075B6A6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6n-7A0A075B6A6 Gm22567-201ENSMUST00000175542 342 ntBASIC18.43■□□□□ 0.54
Trav6n-7A0A075B6A6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.43■□□□□ 0.54
Trav6n-7A0A075B6A6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6n-7A0A075B6A6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6n-7A0A075B6A6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6n-7A0A075B6A6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.43■□□□□ 0.54
Trav6n-7A0A075B6A6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trav6n-7A0A075B6A6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6n-7A0A075B6A6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.42■□□□□ 0.54
Trav6n-7A0A075B6A6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6n-7A0A075B6A6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6n-7A0A075B6A6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6n-7A0A075B6A6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.41■□□□□ 0.54
Trav6n-7A0A075B6A6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trav6n-7A0A075B6A6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6n-7A0A075B6A6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6n-7A0A075B6A6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trav6n-7A0A075B6A6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6n-7A0A075B6A6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6n-7A0A075B6A6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6n-7A0A075B6A6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6n-7A0A075B6A6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6n-7A0A075B6A6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trav6n-7A0A075B6A6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6n-7A0A075B6A6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6n-7A0A075B6A6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trav6n-7A0A075B6A6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6n-7A0A075B6A6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6n-7A0A075B6A6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.39■□□□□ 0.53
Trav6n-7A0A075B6A6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6n-7A0A075B6A6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6n-7A0A075B6A6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6n-7A0A075B6A6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6n-7A0A075B6A6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trav6n-7A0A075B6A6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6n-7A0A075B6A6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.38■□□□□ 0.53
Trav6n-7A0A075B6A6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6n-7A0A075B6A6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trav6n-7A0A075B6A6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6n-7A0A075B6A6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6n-7A0A075B6A6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6n-7A0A075B6A6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6n-7A0A075B6A6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6n-7A0A075B6A6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6n-7A0A075B6A6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trav6n-7A0A075B6A6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.36■□□□□ 0.53
Trav6n-7A0A075B6A6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6n-7A0A075B6A6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6n-7A0A075B6A6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6n-7A0A075B6A6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6n-7A0A075B6A6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6n-7A0A075B6A6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6n-7A0A075B6A6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6n-7A0A075B6A6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6n-7A0A075B6A6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trav6n-7A0A075B6A6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6n-7A0A075B6A6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6n-7A0A075B6A6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.34■□□□□ 0.53
Trav6n-7A0A075B6A6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6n-7A0A075B6A6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Trav6n-7A0A075B6A6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6n-7A0A075B6A6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6n-7A0A075B6A6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6n-7A0A075B6A6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trav6n-7A0A075B6A6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trav6n-7A0A075B6A6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav6n-7A0A075B6A6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms