Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav16A0A075B653 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trav16A0A075B653 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trav16A0A075B653 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav16A0A075B653 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav16A0A075B653 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav16A0A075B653 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav16A0A075B653 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav16A0A075B653 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav16A0A075B653 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav16A0A075B653 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav16A0A075B653 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav16A0A075B653 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav16A0A075B653 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav16A0A075B653 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Trav16A0A075B653 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trav16A0A075B653 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav16A0A075B653 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav16A0A075B653 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav16A0A075B653 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav16A0A075B653 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav16A0A075B653 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav16A0A075B653 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav16A0A075B653 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.7■□□□□ 0.26
Trav16A0A075B653 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav16A0A075B653 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav16A0A075B653 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trav16A0A075B653 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav16A0A075B653 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.69■□□□□ 0.26
Trav16A0A075B653 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav16A0A075B653 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav16A0A075B653 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav16A0A075B653 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav16A0A075B653 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav16A0A075B653 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav16A0A075B653 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav16A0A075B653 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav16A0A075B653 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav16A0A075B653 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav16A0A075B653 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav16A0A075B653 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trav16A0A075B653 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav16A0A075B653 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.67■□□□□ 0.26
Trav16A0A075B653 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav16A0A075B653 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav16A0A075B653 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav16A0A075B653 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav16A0A075B653 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav16A0A075B653 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav16A0A075B653 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav16A0A075B653 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav16A0A075B653 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav16A0A075B653 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Trav16A0A075B653 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trav16A0A075B653 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trav16A0A075B653 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Trav16A0A075B653 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav16A0A075B653 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav16A0A075B653 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav16A0A075B653 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.64■□□□□ 0.25
Trav16A0A075B653 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.64■□□□□ 0.25
Trav16A0A075B653 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav16A0A075B653 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav16A0A075B653 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav16A0A075B653 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.64■□□□□ 0.25
Trav16A0A075B653 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav16A0A075B653 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav16A0A075B653 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.63■□□□□ 0.25
Trav16A0A075B653 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Trav16A0A075B653 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav16A0A075B653 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav16A0A075B653 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.63■□□□□ 0.25
Trav16A0A075B653 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav16A0A075B653 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav16A0A075B653 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav16A0A075B653 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.62■□□□□ 0.25
Trav16A0A075B653 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav16A0A075B653 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav16A0A075B653 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav16A0A075B653 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav16A0A075B653 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav16A0A075B653 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav16A0A075B653 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Trav16A0A075B653 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav16A0A075B653 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav16A0A075B653 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav16A0A075B653 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav16A0A075B653 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trav16A0A075B653 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav16A0A075B653 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Trav16A0A075B653 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav16A0A075B653 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav16A0A075B653 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav16A0A075B653 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav16A0A075B653 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav16A0A075B653 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav16A0A075B653 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav16A0A075B653 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav16A0A075B653 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav16A0A075B653 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms