Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Gm22567-201ENSMUST00000175542 342 ntBASIC17.76■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Gm4799-201ENSMUST00000095396 657 ntBASIC17.75■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.74■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.72■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.72■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.71■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Gm9812-201ENSMUST00000061934 968 ntBASIC17.71■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.71■□□□□ 0.43
Trav15-2-dv6-2A0A075B650 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.7■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.7■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.69■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.69■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.66■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.66■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.66■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.65■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15-2-dv6-2A0A075B650 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav15-2-dv6-2A0A075B650 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav15-2-dv6-2A0A075B650 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trav15-2-dv6-2A0A075B650 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav15-2-dv6-2A0A075B650 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Trav15-2-dv6-2A0A075B650 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trav15-2-dv6-2A0A075B650 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms