Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav6-7-dv9A0A075B639 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav6-7-dv9A0A075B639 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trav6-7-dv9A0A075B639 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trav6-7-dv9A0A075B639 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav6-7-dv9A0A075B639 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Trav6-7-dv9A0A075B639 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav6-7-dv9A0A075B639 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav6-7-dv9A0A075B639 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav6-7-dv9A0A075B639 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav6-7-dv9A0A075B639 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav6-7-dv9A0A075B639 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav6-7-dv9A0A075B639 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav6-7-dv9A0A075B639 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav6-7-dv9A0A075B639 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav6-7-dv9A0A075B639 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav6-7-dv9A0A075B639 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav6-7-dv9A0A075B639 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.24■□□□□ 0.67
Trav6-7-dv9A0A075B639 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav6-7-dv9A0A075B639 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.24■□□□□ 0.67
Trav6-7-dv9A0A075B639 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav6-7-dv9A0A075B639 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav6-7-dv9A0A075B639 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav6-7-dv9A0A075B639 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trav6-7-dv9A0A075B639 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trav6-7-dv9A0A075B639 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav6-7-dv9A0A075B639 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6-7-dv9A0A075B639 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6-7-dv9A0A075B639 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trav6-7-dv9A0A075B639 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6-7-dv9A0A075B639 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.23■□□□□ 0.67
Trav6-7-dv9A0A075B639 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trav6-7-dv9A0A075B639 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6-7-dv9A0A075B639 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6-7-dv9A0A075B639 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trav6-7-dv9A0A075B639 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav6-7-dv9A0A075B639 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav6-7-dv9A0A075B639 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav6-7-dv9A0A075B639 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav6-7-dv9A0A075B639 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Trav6-7-dv9A0A075B639 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav6-7-dv9A0A075B639 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav6-7-dv9A0A075B639 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav6-7-dv9A0A075B639 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.21■□□□□ 0.67
Trav6-7-dv9A0A075B639 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.21■□□□□ 0.67
Trav6-7-dv9A0A075B639 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Trav6-7-dv9A0A075B639 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav6-7-dv9A0A075B639 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav6-7-dv9A0A075B639 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav6-7-dv9A0A075B639 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Trav6-7-dv9A0A075B639 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav6-7-dv9A0A075B639 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav6-7-dv9A0A075B639 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav6-7-dv9A0A075B639 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav6-7-dv9A0A075B639 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav6-7-dv9A0A075B639 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav6-7-dv9A0A075B639 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav6-7-dv9A0A075B639 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav6-7-dv9A0A075B639 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav6-7-dv9A0A075B639 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.19■□□□□ 0.66
Trav6-7-dv9A0A075B639 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trav6-7-dv9A0A075B639 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trav6-7-dv9A0A075B639 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav6-7-dv9A0A075B639 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav6-7-dv9A0A075B639 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trav6-7-dv9A0A075B639 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav6-7-dv9A0A075B639 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav6-7-dv9A0A075B639 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav6-7-dv9A0A075B639 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Trav6-7-dv9A0A075B639 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav6-7-dv9A0A075B639 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav6-7-dv9A0A075B639 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.17■□□□□ 0.66
Trav6-7-dv9A0A075B639 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav6-7-dv9A0A075B639 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav6-7-dv9A0A075B639 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav6-7-dv9A0A075B639 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav6-7-dv9A0A075B639 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav6-7-dv9A0A075B639 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav6-7-dv9A0A075B639 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trav6-7-dv9A0A075B639 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav6-7-dv9A0A075B639 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Trav6-7-dv9A0A075B639 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.16■□□□□ 0.66
Trav6-7-dv9A0A075B639 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav6-7-dv9A0A075B639 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6-7-dv9A0A075B639 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6-7-dv9A0A075B639 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6-7-dv9A0A075B639 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.15■□□□□ 0.66
Trav6-7-dv9A0A075B639 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6-7-dv9A0A075B639 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.15■□□□□ 0.66
Trav6-7-dv9A0A075B639 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Trav6-7-dv9A0A075B639 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Trav6-7-dv9A0A075B639 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav6-7-dv9A0A075B639 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trav6-7-dv9A0A075B639 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
Trav6-7-dv9A0A075B639 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.14■□□□□ 0.66
Trav6-7-dv9A0A075B639 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Trav6-7-dv9A0A075B639 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav6-7-dv9A0A075B639 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav6-7-dv9A0A075B639 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav6-7-dv9A0A075B639 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms