Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.94■□□□□ 0.3
Trav9-1A0A075B601 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav9-1A0A075B601 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav9-1A0A075B601 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav9-1A0A075B601 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trav9-1A0A075B601 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trav9-1A0A075B601 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9-1A0A075B601 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9-1A0A075B601 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trav9-1A0A075B601 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trav9-1A0A075B601 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9-1A0A075B601 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trav9-1A0A075B601 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9-1A0A075B601 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9-1A0A075B601 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9-1A0A075B601 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav9-1A0A075B601 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.92■□□□□ 0.3
Trav9-1A0A075B601 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav9-1A0A075B601 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Trav9-1A0A075B601 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav9-1A0A075B601 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.92■□□□□ 0.3
Trav9-1A0A075B601 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.92■□□□□ 0.3
Trav9-1A0A075B601 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav9-1A0A075B601 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav9-1A0A075B601 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav9-1A0A075B601 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav9-1A0A075B601 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav9-1A0A075B601 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav9-1A0A075B601 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav9-1A0A075B601 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav9-1A0A075B601 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav9-1A0A075B601 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav9-1A0A075B601 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.9■□□□□ 0.3
Trav9-1A0A075B601 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav9-1A0A075B601 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav9-1A0A075B601 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav9-1A0A075B601 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.89■□□□□ 0.3
Trav9-1A0A075B601 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9-1A0A075B601 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Trav9-1A0A075B601 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9-1A0A075B601 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9-1A0A075B601 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9-1A0A075B601 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9-1A0A075B601 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9-1A0A075B601 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trav9-1A0A075B601 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Trav9-1A0A075B601 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav9-1A0A075B601 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trav9-1A0A075B601 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav9-1A0A075B601 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Trav9-1A0A075B601 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav9-1A0A075B601 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav9-1A0A075B601 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav9-1A0A075B601 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav9-1A0A075B601 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav9-1A0A075B601 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav9-1A0A075B601 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9-1A0A075B601 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9-1A0A075B601 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.87■□□□□ 0.29
Trav9-1A0A075B601 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9-1A0A075B601 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9-1A0A075B601 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9-1A0A075B601 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trav9-1A0A075B601 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9-1A0A075B601 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9-1A0A075B601 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9-1A0A075B601 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trav9-1A0A075B601 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9-1A0A075B601 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9-1A0A075B601 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9-1A0A075B601 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9-1A0A075B601 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9-1A0A075B601 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9-1A0A075B601 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav9-1A0A075B601 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9-1A0A075B601 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9-1A0A075B601 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9-1A0A075B601 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.85■□□□□ 0.29
Trav9-1A0A075B601 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav9-1A0A075B601 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.85■□□□□ 0.29
Trav9-1A0A075B601 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav9-1A0A075B601 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav9-1A0A075B601 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9-1A0A075B601 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav9-1A0A075B601 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trav9-1A0A075B601 Scarna2-201ENSMUST00000157560 414 ntBASIC16.84■□□□□ 0.29
Trav9-1A0A075B601 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav9-1A0A075B601 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9-1A0A075B601 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav9-1A0A075B601 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav9-1A0A075B601 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.83■□□□□ 0.28
Trav9-1A0A075B601 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav9-1A0A075B601 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav9-1A0A075B601 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav9-1A0A075B601 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav9-1A0A075B601 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trav9-1A0A075B601 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav9-1A0A075B601 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav9-1A0A075B601 Gm16437-201ENSMUST00000025669 507 ntBASIC16.82■□□□□ 0.28
Trav9-1A0A075B601 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms