Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav1A0A075B5Z4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav1A0A075B5Z4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav1A0A075B5Z4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trav1A0A075B5Z4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Trav1A0A075B5Z4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav1A0A075B5Z4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trav1A0A075B5Z4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trav1A0A075B5Z4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trav1A0A075B5Z4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Trav1A0A075B5Z4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.32■□□□□ 0.84
Trav1A0A075B5Z4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav1A0A075B5Z4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav1A0A075B5Z4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav1A0A075B5Z4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav1A0A075B5Z4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav1A0A075B5Z4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Trav1A0A075B5Z4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Trav1A0A075B5Z4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trav1A0A075B5Z4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav1A0A075B5Z4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav1A0A075B5Z4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav1A0A075B5Z4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trav1A0A075B5Z4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav1A0A075B5Z4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Trav1A0A075B5Z4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.31■□□□□ 0.84
Trav1A0A075B5Z4 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.31■□□□□ 0.84
Trav1A0A075B5Z4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.31■□□□□ 0.84
Trav1A0A075B5Z4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav1A0A075B5Z4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav1A0A075B5Z4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trav1A0A075B5Z4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav1A0A075B5Z4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav1A0A075B5Z4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.3■□□□□ 0.84
Trav1A0A075B5Z4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav1A0A075B5Z4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav1A0A075B5Z4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav1A0A075B5Z4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.3■□□□□ 0.84
Trav1A0A075B5Z4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav1A0A075B5Z4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav1A0A075B5Z4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav1A0A075B5Z4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trav1A0A075B5Z4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Trav1A0A075B5Z4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trav1A0A075B5Z4 Gm11687-201ENSMUST00000118911 886 ntBASIC20.28■□□□□ 0.84
Trav1A0A075B5Z4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Trav1A0A075B5Z4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trav1A0A075B5Z4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav1A0A075B5Z4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav1A0A075B5Z4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Trav1A0A075B5Z4 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.27■□□□□ 0.84
Trav1A0A075B5Z4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav1A0A075B5Z4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav1A0A075B5Z4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trav1A0A075B5Z4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav1A0A075B5Z4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trav1A0A075B5Z4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav1A0A075B5Z4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.26■□□□□ 0.83
Trav1A0A075B5Z4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav1A0A075B5Z4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.25■□□□□ 0.83
Trav1A0A075B5Z4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.25■□□□□ 0.83
Trav1A0A075B5Z4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav1A0A075B5Z4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav1A0A075B5Z4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav1A0A075B5Z4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav1A0A075B5Z4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav1A0A075B5Z4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trav1A0A075B5Z4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav1A0A075B5Z4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav1A0A075B5Z4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Trav1A0A075B5Z4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.24■□□□□ 0.83
Trav1A0A075B5Z4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.24■□□□□ 0.83
Trav1A0A075B5Z4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.24■□□□□ 0.83
Trav1A0A075B5Z4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.24■□□□□ 0.83
Trav1A0A075B5Z4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav1A0A075B5Z4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav1A0A075B5Z4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trav1A0A075B5Z4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav1A0A075B5Z4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trav1A0A075B5Z4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav1A0A075B5Z4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav1A0A075B5Z4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Trav1A0A075B5Z4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.23■□□□□ 0.83
Trav1A0A075B5Z4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav1A0A075B5Z4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Trav1A0A075B5Z4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav1A0A075B5Z4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav1A0A075B5Z4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
Trav1A0A075B5Z4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trav1A0A075B5Z4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav1A0A075B5Z4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trav1A0A075B5Z4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trav1A0A075B5Z4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav1A0A075B5Z4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.21■□□□□ 0.83
Trav1A0A075B5Z4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trav1A0A075B5Z4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.21■□□□□ 0.83
Trav1A0A075B5Z4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav1A0A075B5Z4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Trav1A0A075B5Z4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav1A0A075B5Z4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms