Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-55A0A075B5W6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-55A0A075B5W6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-55A0A075B5W6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-55A0A075B5W6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-55A0A075B5W6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-55A0A075B5W6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.19■□□□□ 0.34
Ighv1-55A0A075B5W6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-55A0A075B5W6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-55A0A075B5W6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.18■□□□□ 0.34
Ighv1-55A0A075B5W6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-55A0A075B5W6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ighv1-55A0A075B5W6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-55A0A075B5W6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-55A0A075B5W6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-55A0A075B5W6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-55A0A075B5W6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ighv1-55A0A075B5W6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ighv1-55A0A075B5W6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Ighv1-55A0A075B5W6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-55A0A075B5W6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.17■□□□□ 0.34
Ighv1-55A0A075B5W6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.17■□□□□ 0.34
Ighv1-55A0A075B5W6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-55A0A075B5W6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-55A0A075B5W6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-55A0A075B5W6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-55A0A075B5W6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-55A0A075B5W6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-55A0A075B5W6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ighv1-55A0A075B5W6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ighv1-55A0A075B5W6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-55A0A075B5W6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-55A0A075B5W6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.17■□□□□ 0.34
Ighv1-55A0A075B5W6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-55A0A075B5W6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-55A0A075B5W6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-55A0A075B5W6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-55A0A075B5W6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-55A0A075B5W6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.16■□□□□ 0.34
Ighv1-55A0A075B5W6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-55A0A075B5W6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-55A0A075B5W6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-55A0A075B5W6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-55A0A075B5W6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-55A0A075B5W6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-55A0A075B5W6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ighv1-55A0A075B5W6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-55A0A075B5W6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-55A0A075B5W6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-55A0A075B5W6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-55A0A075B5W6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ighv1-55A0A075B5W6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ighv1-55A0A075B5W6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.13■□□□□ 0.33
Ighv1-55A0A075B5W6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-55A0A075B5W6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-55A0A075B5W6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-55A0A075B5W6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-55A0A075B5W6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-55A0A075B5W6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-55A0A075B5W6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-55A0A075B5W6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-55A0A075B5W6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-55A0A075B5W6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-55A0A075B5W6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ighv1-55A0A075B5W6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Ighv1-55A0A075B5W6 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-55A0A075B5W6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-55A0A075B5W6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-55A0A075B5W6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-55A0A075B5W6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-55A0A075B5W6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-55A0A075B5W6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Ighv1-55A0A075B5W6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-55A0A075B5W6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-55A0A075B5W6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-55A0A075B5W6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ighv1-55A0A075B5W6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-55A0A075B5W6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-55A0A075B5W6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-55A0A075B5W6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ighv1-55A0A075B5W6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-55A0A075B5W6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-55A0A075B5W6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.1■□□□□ 0.33
Ighv1-55A0A075B5W6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.1■□□□□ 0.33
Ighv1-55A0A075B5W6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ighv1-55A0A075B5W6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-55A0A075B5W6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-55A0A075B5W6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-55A0A075B5W6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-55A0A075B5W6 Gm10420-201ENSMUST00000121713 882 ntBASIC17.09■□□□□ 0.33
Ighv1-55A0A075B5W6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-55A0A075B5W6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-55A0A075B5W6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-55A0A075B5W6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-55A0A075B5W6 Cap2-205ENSMUST00000225824 1634 ntBASIC17.09■□□□□ 0.33
Ighv1-55A0A075B5W6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-55A0A075B5W6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-55A0A075B5W6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-55A0A075B5W6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.09■□□□□ 0.33
Ighv1-55A0A075B5W6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms