Protein–RNA interactions for Protein: Q9Z2E2

Mbd1, Methyl-CpG-binding domain protein 1, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd1Q9Z2E2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Gm43474-201ENSMUST00000196415 774 ntBASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mbd1Q9Z2E2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mbd1Q9Z2E2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Mbd1Q9Z2E2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mbd1Q9Z2E2 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.27□□□□□ -0.12
Mbd1Q9Z2E2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Mbd1Q9Z2E2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mbd1Q9Z2E2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Mbd1Q9Z2E2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mbd1Q9Z2E2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mbd1Q9Z2E2 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.27□□□□□ -0.12
Mbd1Q9Z2E2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd1Q9Z2E2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd1Q9Z2E2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Mbd1Q9Z2E2 Gm5566-201ENSMUST00000116118 459 ntBASIC14.27□□□□□ -0.13
Mbd1Q9Z2E2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd1Q9Z2E2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.27□□□□□ -0.13
Mbd1Q9Z2E2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.27□□□□□ -0.13
Mbd1Q9Z2E2 Gm2445-201ENSMUST00000182798 989 ntBASIC14.27□□□□□ -0.13
Mbd1Q9Z2E2 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.27□□□□□ -0.13
Mbd1Q9Z2E2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd1Q9Z2E2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd1Q9Z2E2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd1Q9Z2E2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd1Q9Z2E2 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd1Q9Z2E2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Mbd1Q9Z2E2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd1Q9Z2E2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd1Q9Z2E2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd1Q9Z2E2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd1Q9Z2E2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Mbd1Q9Z2E2 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Gm26308-201ENSMUST00000157768 69 ntBASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Gm9719-201ENSMUST00000162765 543 ntBASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mbd1Q9Z2E2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.25□□□□□ -0.13
Mbd1Q9Z2E2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd1Q9Z2E2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Mbd1Q9Z2E2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd1Q9Z2E2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd1Q9Z2E2 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Mbd1Q9Z2E2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mbd1Q9Z2E2 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms