Protein–RNA interactions for Protein: Q9WUT7

Ccr9, C-C chemokine receptor type 9, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9Q9WUT7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccr9Q9WUT7 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccr9Q9WUT7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccr9Q9WUT7 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccr9Q9WUT7 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ccr9Q9WUT7 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccr9Q9WUT7 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccr9Q9WUT7 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccr9Q9WUT7 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 BC001981-202ENSMUST00000191393 1545 ntBASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccr9Q9WUT7 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccr9Q9WUT7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccr9Q9WUT7 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccr9Q9WUT7 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccr9Q9WUT7 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccr9Q9WUT7 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Ccr9Q9WUT7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccr9Q9WUT7 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
Ccr9Q9WUT7 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccr9Q9WUT7 Gm6222-201ENSMUST00000120787 396 ntBASIC12.17□□□□□ -0.46
Ccr9Q9WUT7 Gm11745-201ENSMUST00000121669 448 ntBASIC12.17□□□□□ -0.46
Ccr9Q9WUT7 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccr9Q9WUT7 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccr9Q9WUT7 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccr9Q9WUT7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccr9Q9WUT7 AA543401-201ENSMUST00000164248 1269 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms