Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ube3bQ9ES34 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube3bQ9ES34 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ube3bQ9ES34 Gm26464-201ENSMUST00000157094 305 ntBASIC16.59■□□□□ 0.25
Ube3bQ9ES34 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ube3bQ9ES34 Gm7653-201ENSMUST00000214567 508 ntBASIC16.59■□□□□ 0.25
Ube3bQ9ES34 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.59■□□□□ 0.25
Ube3bQ9ES34 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.59■□□□□ 0.25
Ube3bQ9ES34 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ube3bQ9ES34 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube3bQ9ES34 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube3bQ9ES34 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ube3bQ9ES34 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ube3bQ9ES34 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube3bQ9ES34 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube3bQ9ES34 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube3bQ9ES34 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube3bQ9ES34 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.59■□□□□ 0.25
Ube3bQ9ES34 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube3bQ9ES34 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ube3bQ9ES34 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ube3bQ9ES34 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ube3bQ9ES34 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ube3bQ9ES34 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ube3bQ9ES34 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.58■□□□□ 0.25
Ube3bQ9ES34 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ube3bQ9ES34 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Gm15678-201ENSMUST00000117573 960 ntBASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Gm12138-201ENSMUST00000122180 951 ntBASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Gm15376-201ENSMUST00000122258 783 ntBASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Gm18307-201ENSMUST00000206864 949 ntBASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube3bQ9ES34 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ube3bQ9ES34 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Gm45384-201ENSMUST00000210451 277 ntBASIC16.57■□□□□ 0.24
Ube3bQ9ES34 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Ube3bQ9ES34 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube3bQ9ES34 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms