Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 AA619741-201ENSMUST00000195095 646 ntBASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpne8Q9DC53 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Gm6415-201ENSMUST00000118488 348 ntBASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Gm43575-201ENSMUST00000196420 516 ntBASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Gm6916-202ENSMUST00000205523 195 ntBASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Gm16476-201ENSMUST00000221544 139 ntBASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Cpne8Q9DC53 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Cpne8Q9DC53 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cpne8Q9DC53 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cpne8Q9DC53 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cpne8Q9DC53 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cpne8Q9DC53 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Cpne8Q9DC53 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cpne8Q9DC53 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.58□□□□□ -0.07
Cpne8Q9DC53 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Mir1897-201ENSMUST00000122581 272 ntBASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.58□□□□□ -0.08
Cpne8Q9DC53 AA543401-201ENSMUST00000164248 1269 ntBASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpne8Q9DC53 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms