Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Smc3Q9CW03 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smc3Q9CW03 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smc3Q9CW03 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Smc3Q9CW03 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Smc3Q9CW03 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Smc3Q9CW03 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Smc3Q9CW03 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Smc3Q9CW03 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.46■□□□□ 0.22
Smc3Q9CW03 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Smc3Q9CW03 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smc3Q9CW03 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Gm11745-201ENSMUST00000121669 448 ntBASIC16.45■□□□□ 0.22
Smc3Q9CW03 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Smc3Q9CW03 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.45■□□□□ 0.22
Smc3Q9CW03 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smc3Q9CW03 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.44■□□□□ 0.22
Smc3Q9CW03 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.44■□□□□ 0.22
Smc3Q9CW03 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.44■□□□□ 0.22
Smc3Q9CW03 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smc3Q9CW03 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.44■□□□□ 0.22
Smc3Q9CW03 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.44■□□□□ 0.22
Smc3Q9CW03 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smc3Q9CW03 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.43■□□□□ 0.22
Smc3Q9CW03 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Rprl2-201ENSMUST00000157150 290 ntBASIC16.43■□□□□ 0.22
Smc3Q9CW03 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.43■□□□□ 0.22
Smc3Q9CW03 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms