Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Mir5132-201ENSMUST00000175166 71 ntBASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Gm18753-201ENSMUST00000201000 566 ntBASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Gm5687-201ENSMUST00000118252 640 ntBASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Gm12241-201ENSMUST00000118330 726 ntBASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Gm13369-201ENSMUST00000119442 987 ntBASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Olfr284-202ENSMUST00000206647 966 ntBASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Snora73a-201ENSMUST00000082453 205 ntBASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Gm24447-201ENSMUST00000083977 338 ntBASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cldnd1Q9CQX5 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 Mir698-201ENSMUST00000102164 109 ntBASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 Mir686-201ENSMUST00000102174 109 ntBASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 Gm29741-201ENSMUST00000192667 421 ntBASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 Gm45865-201ENSMUST00000211815 945 ntBASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 Mir433-201ENSMUST00000093564 124 ntBASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldnd1Q9CQX5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cldnd1Q9CQX5 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cldnd1Q9CQX5 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cldnd1Q9CQX5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms