Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retreg3Q9CQV4 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Retreg3Q9CQV4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Retreg3Q9CQV4 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retreg3Q9CQV4 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retreg3Q9CQV4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retreg3Q9CQV4 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retreg3Q9CQV4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Gm8584-201ENSMUST00000171982 758 ntBASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 AC159205.7-201ENSMUST00000225988 692 ntBASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg3Q9CQV4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Gm13453-201ENSMUST00000118708 357 ntBASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Gm24380-201ENSMUST00000122696 324 ntBASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Gm25144-201ENSMUST00000179561 110 ntBASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Gm25352-201ENSMUST00000179815 110 ntBASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Gm26736-201ENSMUST00000180425 1236 ntBASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Gm37709-201ENSMUST00000195074 600 ntBASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 AC154616.1-201ENSMUST00000226995 804 ntBASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg3Q9CQV4 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms