Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trim33Q99PP7 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.93□□□□□ -0.18
Trim33Q99PP7 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Gm45453-201ENSMUST00000211758 853 ntBASIC13.92□□□□□ -0.18
Trim33Q99PP7 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trim33Q99PP7 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.92□□□□□ -0.18
Trim33Q99PP7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.92□□□□□ -0.18
Trim33Q99PP7 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim33Q99PP7 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.91□□□□□ -0.18
Trim33Q99PP7 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.91□□□□□ -0.18
Trim33Q99PP7 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.91□□□□□ -0.18
Trim33Q99PP7 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.91□□□□□ -0.18
Trim33Q99PP7 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.91□□□□□ -0.18
Trim33Q99PP7 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.91□□□□□ -0.18
Trim33Q99PP7 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim33Q99PP7 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.91□□□□□ -0.18
Trim33Q99PP7 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms