Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Gm5264-201ENSMUST00000190584 848 ntBASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim8Q99PJ2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim8Q99PJ2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Gm5867-201ENSMUST00000063197 592 ntBASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim8Q99PJ2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trim8Q99PJ2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim8Q99PJ2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim8Q99PJ2 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.71□□□□□ -0.22
Trim8Q99PJ2 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim8Q99PJ2 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim8Q99PJ2 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Gm15467-201ENSMUST00000120582 445 ntBASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim8Q99PJ2 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms