Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.83□□□□□ -0.04
Sf3b1Q99NB9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b1Q99NB9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Sf3b1Q99NB9 Gm15240-201ENSMUST00000118156 720 ntBASIC14.83□□□□□ -0.04
Sf3b1Q99NB9 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.83□□□□□ -0.04
Sf3b1Q99NB9 Gm8602-201ENSMUST00000184045 607 ntBASIC14.83□□□□□ -0.04
Sf3b1Q99NB9 Gm18905-201ENSMUST00000205454 928 ntBASIC14.83□□□□□ -0.04
Sf3b1Q99NB9 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.83□□□□□ -0.04
Sf3b1Q99NB9 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.83□□□□□ -0.04
Sf3b1Q99NB9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b1Q99NB9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b1Q99NB9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b1Q99NB9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.83□□□□□ -0.04
Sf3b1Q99NB9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b1Q99NB9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.83□□□□□ -0.04
Sf3b1Q99NB9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b1Q99NB9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Gm9002-201ENSMUST00000178437 499 ntBASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Mir7654-201ENSMUST00000185082 70 ntBASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Gm18307-201ENSMUST00000206864 949 ntBASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b1Q99NB9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Gm28911-201ENSMUST00000188837 117 ntBASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Sf3b1Q99NB9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b1Q99NB9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms