Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Gm27702-201ENSMUST00000184512 56 ntBASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Gm2756-201ENSMUST00000195851 400 ntBASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf111Q99ML9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rnf111Q99ML9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Rnf111Q99ML9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rnf111Q99ML9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Gm2810-201ENSMUST00000118681 990 ntBASIC13.58□□□□□ -0.24
Rnf111Q99ML9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.58□□□□□ -0.24
Rnf111Q99ML9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf111Q99ML9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rnf111Q99ML9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms