Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkd1Q99MH6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Gm11025-201ENSMUST00000140773 466 ntBASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkd1Q99MH6 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Gm18737-201ENSMUST00000173594 937 ntBASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.18□□□□□ -0.3
Nkd1Q99MH6 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkd1Q99MH6 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkd1Q99MH6 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkd1Q99MH6 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nkd1Q99MH6 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkd1Q99MH6 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkd1Q99MH6 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkd1Q99MH6 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkd1Q99MH6 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkd1Q99MH6 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkd1Q99MH6 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.17□□□□□ -0.3
Nkd1Q99MH6 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkd1Q99MH6 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nkd1Q99MH6 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkd1Q99MH6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkd1Q99MH6 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.17□□□□□ -0.3
Nkd1Q99MH6 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.17□□□□□ -0.3
Nkd1Q99MH6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.17□□□□□ -0.3
Nkd1Q99MH6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.17□□□□□ -0.3
Nkd1Q99MH6 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Nkd1Q99MH6 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms