Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nck1Q99M51 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nck1Q99M51 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nck1Q99M51 Gm5177-201ENSMUST00000183092 997 ntBASIC13.35□□□□□ -0.27
Nck1Q99M51 Gm27301-201ENSMUST00000184012 127 ntBASIC13.35□□□□□ -0.27
Nck1Q99M51 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.35□□□□□ -0.27
Nck1Q99M51 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nck1Q99M51 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nck1Q99M51 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nck1Q99M51 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nck1Q99M51 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nck1Q99M51 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nck1Q99M51 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nck1Q99M51 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nck1Q99M51 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nck1Q99M51 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.35□□□□□ -0.27
Nck1Q99M51 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nck1Q99M51 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nck1Q99M51 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Nck1Q99M51 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Nck1Q99M51 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.34□□□□□ -0.27
Nck1Q99M51 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.34□□□□□ -0.27
Nck1Q99M51 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.34□□□□□ -0.27
Nck1Q99M51 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.34□□□□□ -0.27
Nck1Q99M51 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.34□□□□□ -0.27
Nck1Q99M51 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.34□□□□□ -0.27
Nck1Q99M51 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nck1Q99M51 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.34□□□□□ -0.27
Nck1Q99M51 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nck1Q99M51 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nck1Q99M51 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nck1Q99M51 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Nck1Q99M51 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nck1Q99M51 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Nck1Q99M51 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.33□□□□□ -0.28
Nck1Q99M51 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.33□□□□□ -0.28
Nck1Q99M51 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.33□□□□□ -0.28
Nck1Q99M51 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Nck1Q99M51 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.33□□□□□ -0.28
Nck1Q99M51 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nck1Q99M51 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nck1Q99M51 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nck1Q99M51 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.32□□□□□ -0.28
Nck1Q99M51 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nck1Q99M51 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nck1Q99M51 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nck1Q99M51 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nck1Q99M51 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nck1Q99M51 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nck1Q99M51 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nck1Q99M51 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nck1Q99M51 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nck1Q99M51 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms