Protein–RNA interactions for Protein: Q99LM3

Smtnl1, Smoothelin-like protein 1, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smtnl1Q99LM3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Smtnl1Q99LM3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Smtnl1Q99LM3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Gm8000-201ENSMUST00000188378 592 ntBASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Gm5264-201ENSMUST00000190584 848 ntBASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smtnl1Q99LM3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Smtnl1Q99LM3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smtnl1Q99LM3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.33■□□□□ 0.05
Smtnl1Q99LM3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Smtnl1Q99LM3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smtnl1Q99LM3 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.33■□□□□ 0.05
Smtnl1Q99LM3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Smtnl1Q99LM3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smtnl1Q99LM3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smtnl1Q99LM3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smtnl1Q99LM3 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.33■□□□□ 0.04
Smtnl1Q99LM3 Gm9824-201ENSMUST00000178707 561 ntBASIC15.33■□□□□ 0.04
Smtnl1Q99LM3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.33■□□□□ 0.04
Smtnl1Q99LM3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smtnl1Q99LM3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smtnl1Q99LM3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Smtnl1Q99LM3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smtnl1Q99LM3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Smtnl1Q99LM3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smtnl1Q99LM3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.33■□□□□ 0.04
Smtnl1Q99LM3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smtnl1Q99LM3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Smtnl1Q99LM3 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.33■□□□□ 0.04
Smtnl1Q99LM3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smtnl1Q99LM3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smtnl1Q99LM3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smtnl1Q99LM3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Gm25287-201ENSMUST00000103846 110 ntBASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Gm22918-201ENSMUST00000103855 110 ntBASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Gm18889-201ENSMUST00000174284 929 ntBASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Gm2445-201ENSMUST00000182798 989 ntBASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smtnl1Q99LM3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smtnl1Q99LM3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smtnl1Q99LM3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smtnl1Q99LM3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smtnl1Q99LM3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smtnl1Q99LM3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smtnl1Q99LM3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smtnl1Q99LM3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smtnl1Q99LM3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smtnl1Q99LM3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Smtnl1Q99LM3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smtnl1Q99LM3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.31■□□□□ 0.04
Smtnl1Q99LM3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.31■□□□□ 0.04
Smtnl1Q99LM3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms