Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdk5rap3Q99LM2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Gm18206-201ENSMUST00000207027 926 ntBASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Gm10175-201ENSMUST00000086013 645 ntBASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cdk5rap3Q99LM2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Gm11779-201ENSMUST00000118541 368 ntBASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Gm14494-201ENSMUST00000118786 435 ntBASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdk5rap3Q99LM2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap3Q99LM2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms