Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.12□□□□□ -0.15
Cdk9Q99J95 AW822252-206ENSMUST00000208904 237 ntBASIC14.12□□□□□ -0.15
Cdk9Q99J95 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.12□□□□□ -0.15
Cdk9Q99J95 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.12□□□□□ -0.15
Cdk9Q99J95 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk9Q99J95 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Gm4899-201ENSMUST00000178708 719 ntBASIC14.11□□□□□ -0.15
Cdk9Q99J95 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.11□□□□□ -0.15
Cdk9Q99J95 Gm18206-201ENSMUST00000207027 926 ntBASIC14.11□□□□□ -0.15
Cdk9Q99J95 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk9Q99J95 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cdk9Q99J95 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk9Q99J95 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.1□□□□□ -0.15
Cdk9Q99J95 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Gm1401-201ENSMUST00000122048 772 ntBASIC14.1□□□□□ -0.15
Cdk9Q99J95 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.1□□□□□ -0.15
Cdk9Q99J95 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Gm9182-201ENSMUST00000217829 639 ntBASIC14.1□□□□□ -0.15
Cdk9Q99J95 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.1□□□□□ -0.15
Cdk9Q99J95 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.1□□□□□ -0.15
Cdk9Q99J95 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.1□□□□□ -0.15
Cdk9Q99J95 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.1□□□□□ -0.15
Cdk9Q99J95 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk9Q99J95 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.09□□□□□ -0.15
Cdk9Q99J95 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.09□□□□□ -0.15
Cdk9Q99J95 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk9Q99J95 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.09□□□□□ -0.15
Cdk9Q99J95 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms