Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC16.07■□□□□ 0.16
Rfc4Q99J62 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfc4Q99J62 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfc4Q99J62 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.07■□□□□ 0.16
Rfc4Q99J62 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.07■□□□□ 0.16
Rfc4Q99J62 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rfc4Q99J62 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.07■□□□□ 0.16
Rfc4Q99J62 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfc4Q99J62 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rfc4Q99J62 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfc4Q99J62 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfc4Q99J62 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfc4Q99J62 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.06■□□□□ 0.16
Rfc4Q99J62 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.06■□□□□ 0.16
Rfc4Q99J62 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc4Q99J62 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC16.06■□□□□ 0.16
Rfc4Q99J62 AC122459.1-201ENSMUST00000228373 885 ntBASIC16.06■□□□□ 0.16
Rfc4Q99J62 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc4Q99J62 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.06■□□□□ 0.16
Rfc4Q99J62 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc4Q99J62 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.05■□□□□ 0.16
Rfc4Q99J62 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Gm12485-201ENSMUST00000119641 291 ntBASIC16.05■□□□□ 0.16
Rfc4Q99J62 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Gm42442-201ENSMUST00000197951 1133 ntBASIC16.05■□□□□ 0.16
Rfc4Q99J62 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Gm10012-201ENSMUST00000078252 192 ntBASIC16.05■□□□□ 0.16
Rfc4Q99J62 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rfc4Q99J62 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc4Q99J62 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.04■□□□□ 0.16
Rfc4Q99J62 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Gm15198-201ENSMUST00000117283 177 ntBASIC16.04■□□□□ 0.16
Rfc4Q99J62 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc4Q99J62 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.04■□□□□ 0.16
Rfc4Q99J62 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.04■□□□□ 0.16
Rfc4Q99J62 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Olfr582-201ENSMUST00000098212 960 ntBASIC16.04■□□□□ 0.16
Rfc4Q99J62 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc4Q99J62 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms