Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Mir449b-201ENSMUST00000104833 80 ntBASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Gm15957-201ENSMUST00000118893 974 ntBASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Gm9719-201ENSMUST00000162765 543 ntBASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Gm45453-201ENSMUST00000211758 853 ntBASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha8Q91Y12 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Pcdha8Q91Y12 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Gm5566-201ENSMUST00000116118 459 ntBASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Gm8584-201ENSMUST00000171982 758 ntBASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Gm44608-201ENSMUST00000206827 855 ntBASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 BC001981-202ENSMUST00000191393 1545 ntBASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdha8Q91Y12 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Gm27631-201ENSMUST00000184163 466 ntBASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Gm5779-201ENSMUST00000218467 910 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms