Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trex1Q91XB0 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trex1Q91XB0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trex1Q91XB0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trex1Q91XB0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trex1Q91XB0 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trex1Q91XB0 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trex1Q91XB0 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.96■□□□□ 0.15
Trex1Q91XB0 Gm15371-201ENSMUST00000117057 784 ntBASIC15.96■□□□□ 0.15
Trex1Q91XB0 Gm13226-201ENSMUST00000117838 404 ntBASIC15.96■□□□□ 0.15
Trex1Q91XB0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trex1Q91XB0 Gm38223-201ENSMUST00000194484 695 ntBASIC15.96■□□□□ 0.15
Trex1Q91XB0 Gm44397-201ENSMUST00000195950 113 ntBASIC15.96■□□□□ 0.15
Trex1Q91XB0 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trex1Q91XB0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trex1Q91XB0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trex1Q91XB0 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.96■□□□□ 0.15
Trex1Q91XB0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trex1Q91XB0 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trex1Q91XB0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trex1Q91XB0 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trex1Q91XB0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trex1Q91XB0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trex1Q91XB0 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.96■□□□□ 0.14
Trex1Q91XB0 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.96■□□□□ 0.14
Trex1Q91XB0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Trex1Q91XB0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Gm8584-201ENSMUST00000171982 758 ntBASIC15.95■□□□□ 0.14
Trex1Q91XB0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Gm27847-201ENSMUST00000183711 107 ntBASIC15.95■□□□□ 0.14
Trex1Q91XB0 Gm27375-201ENSMUST00000183799 107 ntBASIC15.95■□□□□ 0.14
Trex1Q91XB0 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.95■□□□□ 0.14
Trex1Q91XB0 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.95■□□□□ 0.14
Trex1Q91XB0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.94■□□□□ 0.14
Trex1Q91XB0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Gm12742-201ENSMUST00000117326 410 ntBASIC15.94■□□□□ 0.14
Trex1Q91XB0 Gm12957-201ENSMUST00000117835 377 ntBASIC15.94■□□□□ 0.14
Trex1Q91XB0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trex1Q91XB0 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.94■□□□□ 0.14
Trex1Q91XB0 Gm38671-201ENSMUST00000200573 130 ntBASIC15.94■□□□□ 0.14
Trex1Q91XB0 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Gm10012-201ENSMUST00000078252 192 ntBASIC15.94■□□□□ 0.14
Trex1Q91XB0 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trex1Q91XB0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms