Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx1Q91V10 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx1Q91V10 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx1Q91V10 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx1Q91V10 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx1Q91V10 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Vsx1Q91V10 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Vsx1Q91V10 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Gm15429-201ENSMUST00000151268 798 ntBASIC13.81□□□□□ -0.2
Vsx1Q91V10 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.81□□□□□ -0.2
Vsx1Q91V10 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx1Q91V10 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.8□□□□□ -0.2
Vsx1Q91V10 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Gm12928-201ENSMUST00000117115 573 ntBASIC13.8□□□□□ -0.2
Vsx1Q91V10 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.8□□□□□ -0.2
Vsx1Q91V10 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Mir3547-201ENSMUST00000175461 88 ntBASIC13.8□□□□□ -0.2
Vsx1Q91V10 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Gm18054-201ENSMUST00000207539 555 ntBASIC13.8□□□□□ -0.2
Vsx1Q91V10 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx1Q91V10 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx1Q91V10 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Gm27243-201ENSMUST00000183964 521 ntBASIC13.79□□□□□ -0.2
Vsx1Q91V10 Gm29649-201ENSMUST00000185649 419 ntBASIC13.79□□□□□ -0.2
Vsx1Q91V10 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.79□□□□□ -0.2
Vsx1Q91V10 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.79□□□□□ -0.2
Vsx1Q91V10 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.79□□□□□ -0.2
Vsx1Q91V10 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.79□□□□□ -0.2
Vsx1Q91V10 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx1Q91V10 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms