Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.48□□□□□ -0.09
Trim60Q8VI40 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trim60Q8VI40 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Trim60Q8VI40 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim60Q8VI40 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim60Q8VI40 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim60Q8VI40 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim60Q8VI40 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim60Q8VI40 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim60Q8VI40 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim60Q8VI40 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim60Q8VI40 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.47□□□□□ -0.09
Trim60Q8VI40 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.47□□□□□ -0.09
Trim60Q8VI40 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
Trim60Q8VI40 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trim60Q8VI40 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trim60Q8VI40 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.47□□□□□ -0.09
Trim60Q8VI40 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim60Q8VI40 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trim60Q8VI40 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim60Q8VI40 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Trim60Q8VI40 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim60Q8VI40 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim60Q8VI40 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim60Q8VI40 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim60Q8VI40 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim60Q8VI40 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim60Q8VI40 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim60Q8VI40 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim60Q8VI40 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trim60Q8VI40 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Trim60Q8VI40 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim60Q8VI40 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.46□□□□□ -0.09
Trim60Q8VI40 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim60Q8VI40 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim60Q8VI40 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.46□□□□□ -0.09
Trim60Q8VI40 Rprl2-201ENSMUST00000157150 290 ntBASIC14.46□□□□□ -0.09
Trim60Q8VI40 Gm18206-201ENSMUST00000207027 926 ntBASIC14.46□□□□□ -0.09
Trim60Q8VI40 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.46□□□□□ -0.09
Trim60Q8VI40 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim60Q8VI40 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.46□□□□□ -0.09
Trim60Q8VI40 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim60Q8VI40 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim60Q8VI40 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trim60Q8VI40 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trim60Q8VI40 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trim60Q8VI40 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim60Q8VI40 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Trim60Q8VI40 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim60Q8VI40 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.46□□□□□ -0.09
Trim60Q8VI40 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim60Q8VI40 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim60Q8VI40 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trim60Q8VI40 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim60Q8VI40 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.46□□□□□ -0.1
Trim60Q8VI40 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim60Q8VI40 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trim60Q8VI40 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Gm6222-201ENSMUST00000120787 396 ntBASIC14.45□□□□□ -0.1
Trim60Q8VI40 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trim60Q8VI40 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.45□□□□□ -0.1
Trim60Q8VI40 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trim60Q8VI40 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.45□□□□□ -0.1
Trim60Q8VI40 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim60Q8VI40 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim60Q8VI40 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms