Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Gm22189-201ENSMUST00000103822 86 ntBASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Gm15460-201ENSMUST00000118147 391 ntBASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Gm12882-201ENSMUST00000121696 517 ntBASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ndc1Q8VCB1 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 Gm15393-201ENSMUST00000120499 219 ntBASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ndc1Q8VCB1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Ndc1Q8VCB1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ndc1Q8VCB1 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ndc1Q8VCB1 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.21□□□□□ -0.3
Ndc1Q8VCB1 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Ndc1Q8VCB1 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.21□□□□□ -0.3
Ndc1Q8VCB1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ndc1Q8VCB1 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ndc1Q8VCB1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ndc1Q8VCB1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Gm12585-201ENSMUST00000117307 290 ntBASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Gm14928-201ENSMUST00000120198 477 ntBASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms