Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpap2Q8VC34 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpap2Q8VC34 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.36■□□□□ 0.05
Rpap2Q8VC34 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpap2Q8VC34 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rpap2Q8VC34 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpap2Q8VC34 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rpap2Q8VC34 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpap2Q8VC34 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpap2Q8VC34 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpap2Q8VC34 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpap2Q8VC34 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rpap2Q8VC34 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpap2Q8VC34 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Gm4875-201ENSMUST00000118257 786 ntBASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpap2Q8VC34 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rpap2Q8VC34 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rpap2Q8VC34 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rpap2Q8VC34 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
Rpap2Q8VC34 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Rpap2Q8VC34 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.33■□□□□ 0.05
Rpap2Q8VC34 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpap2Q8VC34 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpap2Q8VC34 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rpap2Q8VC34 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rpap2Q8VC34 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.33■□□□□ 0.04
Rpap2Q8VC34 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpap2Q8VC34 Mir497b-201ENSMUST00000093601 125 ntBASIC15.33■□□□□ 0.04
Rpap2Q8VC34 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rpap2Q8VC34 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpap2Q8VC34 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.33■□□□□ 0.04
Rpap2Q8VC34 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpap2Q8VC34 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpap2Q8VC34 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rpap2Q8VC34 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rpap2Q8VC34 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms