Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Top1mtQ8R4U6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Top1mtQ8R4U6 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Top1mtQ8R4U6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Top1mtQ8R4U6 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Top1mtQ8R4U6 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Top1mtQ8R4U6 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Top1mtQ8R4U6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Top1mtQ8R4U6 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Top1mtQ8R4U6 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Gm15460-201ENSMUST00000118147 391 ntBASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Gm6888-201ENSMUST00000221983 706 ntBASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Top1mtQ8R4U6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Gm2445-201ENSMUST00000182798 989 ntBASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Gm9229-201ENSMUST00000222777 126 ntBASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Top1mtQ8R4U6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Top1mtQ8R4U6 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms