Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Gm9385-201ENSMUST00000117563 472 ntBASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Gm15483-201ENSMUST00000120338 456 ntBASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Gm5177-201ENSMUST00000183092 997 ntBASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nudcd3Q8R1N4 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nudcd3Q8R1N4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms