Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Treml1Q8K558 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.8□□□□□ -0.2
Treml1Q8K558 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Treml1Q8K558 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Treml1Q8K558 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Treml1Q8K558 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Treml1Q8K558 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Treml1Q8K558 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Treml1Q8K558 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.8□□□□□ -0.2
Treml1Q8K558 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Treml1Q8K558 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Treml1Q8K558 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.79□□□□□ -0.2
Treml1Q8K558 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Treml1Q8K558 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.79□□□□□ -0.2
Treml1Q8K558 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.79□□□□□ -0.2
Treml1Q8K558 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.79□□□□□ -0.2
Treml1Q8K558 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.79□□□□□ -0.2
Treml1Q8K558 Gm37714-201ENSMUST00000194742 342 ntBASIC13.79□□□□□ -0.2
Treml1Q8K558 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.79□□□□□ -0.2
Treml1Q8K558 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Treml1Q8K558 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
Treml1Q8K558 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Treml1Q8K558 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Treml1Q8K558 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.79□□□□□ -0.2
Treml1Q8K558 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Treml1Q8K558 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Treml1Q8K558 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Treml1Q8K558 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.78□□□□□ -0.2
Treml1Q8K558 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.78□□□□□ -0.2
Treml1Q8K558 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Treml1Q8K558 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.78□□□□□ -0.2
Treml1Q8K558 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Treml1Q8K558 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.78□□□□□ -0.2
Treml1Q8K558 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.78□□□□□ -0.2
Treml1Q8K558 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.78□□□□□ -0.2
Treml1Q8K558 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.78□□□□□ -0.2
Treml1Q8K558 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Treml1Q8K558 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.78□□□□□ -0.2
Treml1Q8K558 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Treml1Q8K558 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Treml1Q8K558 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Treml1Q8K558 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Treml1Q8K558 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Treml1Q8K558 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.77□□□□□ -0.2
Treml1Q8K558 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Treml1Q8K558 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Treml1Q8K558 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Treml1Q8K558 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Treml1Q8K558 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Treml1Q8K558 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Treml1Q8K558 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.77□□□□□ -0.21
Treml1Q8K558 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Treml1Q8K558 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Treml1Q8K558 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms