Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Shtn1Q8K2Q9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shtn1Q8K2Q9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Shtn1Q8K2Q9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shtn1Q8K2Q9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shtn1Q8K2Q9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shtn1Q8K2Q9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Shtn1Q8K2Q9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Shtn1Q8K2Q9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Shtn1Q8K2Q9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Carlr-201ENSMUST00000181515 2574 ntBASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Gm8927-201ENSMUST00000181978 981 ntBASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Gm45880-201ENSMUST00000213041 853 ntBASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Gm3222-201ENSMUST00000071282 990 ntBASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shtn1Q8K2Q9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Gm12384-201ENSMUST00000119228 919 ntBASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Gm6983-201ENSMUST00000214912 628 ntBASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Gm45930-201ENSMUST00000221330 292 ntBASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shtn1Q8K2Q9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 Gm22331-201ENSMUST00000158066 136 ntBASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 Gm7553-201ENSMUST00000185805 1426 ntBASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Shtn1Q8K2Q9 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.42■□□□□ 0.22
Shtn1Q8K2Q9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shtn1Q8K2Q9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shtn1Q8K2Q9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Shtn1Q8K2Q9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shtn1Q8K2Q9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shtn1Q8K2Q9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.42■□□□□ 0.22
Shtn1Q8K2Q9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC16.42■□□□□ 0.22
Shtn1Q8K2Q9 Gm27243-201ENSMUST00000183964 521 ntBASIC16.42■□□□□ 0.22
Shtn1Q8K2Q9 Gm27516-201ENSMUST00000184237 98 ntBASIC16.42■□□□□ 0.22
Shtn1Q8K2Q9 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.42■□□□□ 0.22
Shtn1Q8K2Q9 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC16.42■□□□□ 0.22
Shtn1Q8K2Q9 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shtn1Q8K2Q9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shtn1Q8K2Q9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shtn1Q8K2Q9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shtn1Q8K2Q9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shtn1Q8K2Q9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms