Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Syne4Q8CII8 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Syne4Q8CII8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Syne4Q8CII8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syne4Q8CII8 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.74■□□□□ 0.11
Syne4Q8CII8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Gm22018-201ENSMUST00000104357 131 ntBASIC15.74■□□□□ 0.11
Syne4Q8CII8 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.74■□□□□ 0.11
Syne4Q8CII8 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Gm27682-201ENSMUST00000183930 110 ntBASIC15.74■□□□□ 0.11
Syne4Q8CII8 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Itm2b-204ENSMUST00000228637 783 ntBASIC15.74■□□□□ 0.11
Syne4Q8CII8 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Gm24526-201ENSMUST00000082921 158 ntBASIC15.74■□□□□ 0.11
Syne4Q8CII8 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.74■□□□□ 0.11
Syne4Q8CII8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Syne4Q8CII8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.73■□□□□ 0.11
Syne4Q8CII8 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.73■□□□□ 0.11
Syne4Q8CII8 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.73■□□□□ 0.11
Syne4Q8CII8 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.73■□□□□ 0.11
Syne4Q8CII8 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Syne4Q8CII8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Gm5687-201ENSMUST00000118252 640 ntBASIC15.72■□□□□ 0.11
Syne4Q8CII8 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Gm4271-201ENSMUST00000174444 973 ntBASIC15.72■□□□□ 0.11
Syne4Q8CII8 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.72■□□□□ 0.11
Syne4Q8CII8 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Syne4Q8CII8 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.72■□□□□ 0.11
Syne4Q8CII8 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms