Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip4Q8CI96 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Gm15693-201ENSMUST00000120470 637 ntBASIC14.13□□□□□ -0.15
Clip4Q8CI96 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clip4Q8CI96 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.13□□□□□ -0.15
Clip4Q8CI96 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip4Q8CI96 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip4Q8CI96 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.12□□□□□ -0.15
Clip4Q8CI96 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Grk6-205ENSMUST00000224653 2976 ntBASIC14.12□□□□□ -0.15
Clip4Q8CI96 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 AA543401-201ENSMUST00000164248 1269 ntBASIC14.12□□□□□ -0.15
Clip4Q8CI96 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.12□□□□□ -0.15
Clip4Q8CI96 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Clip4Q8CI96 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Clip4Q8CI96 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clip4Q8CI96 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clip4Q8CI96 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clip4Q8CI96 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clip4Q8CI96 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clip4Q8CI96 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.11□□□□□ -0.15
Clip4Q8CI96 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.11□□□□□ -0.15
Clip4Q8CI96 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clip4Q8CI96 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clip4Q8CI96 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clip4Q8CI96 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clip4Q8CI96 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Clip4Q8CI96 Gm6415-201ENSMUST00000118488 348 ntBASIC14.11□□□□□ -0.15
Clip4Q8CI96 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Clip4Q8CI96 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clip4Q8CI96 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clip4Q8CI96 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clip4Q8CI96 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms