Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Gm7862-201ENSMUST00000121461 292 ntBASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Gm5479-201ENSMUST00000160578 435 ntBASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Gm27300-201ENSMUST00000184085 97 ntBASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Gm28033-201ENSMUST00000184224 96 ntBASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Gm27335-201ENSMUST00000184758 97 ntBASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc28bQ8CEG5 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc28bQ8CEG5 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc28bQ8CEG5 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.83□□□□□ -0.19
Ccdc28bQ8CEG5 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Ccdc28bQ8CEG5 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc28bQ8CEG5 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccdc28bQ8CEG5 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Ccdc28bQ8CEG5 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Ank2-226ENSMUST00000189368 339 ntBASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Gm7977-201ENSMUST00000193787 748 ntBASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc28bQ8CEG5 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Gm13036-201ENSMUST00000117799 748 ntBASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc28bQ8CEG5 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms