Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Gm15957-201ENSMUST00000118893 974 ntBASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Lysmd4Q8CC84 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lysmd4Q8CC84 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lysmd4Q8CC84 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lysmd4Q8CC84 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lysmd4Q8CC84 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Lysmd4Q8CC84 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lysmd4Q8CC84 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms