Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Gm27194-201ENSMUST00000175753 2936 ntBASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Gm9544-201ENSMUST00000223349 2482 ntBASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Fam43aQ8BUP8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.68■□□□□ 0.1
Fam43aQ8BUP8 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Gm25911-201ENSMUST00000157621 56 ntBASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam43aQ8BUP8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam43aQ8BUP8 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam43aQ8BUP8 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam43aQ8BUP8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam43aQ8BUP8 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam43aQ8BUP8 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Fam43aQ8BUP8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.66■□□□□ 0.1
Fam43aQ8BUP8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Fam43aQ8BUP8 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms