Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Rprl2-201ENSMUST00000157150 290 ntBASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Gm38225-201ENSMUST00000194001 393 ntBASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.53□□□□□ -0.24
Cpne3Q8BT60 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpne3Q8BT60 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpne3Q8BT60 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpne3Q8BT60 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.52□□□□□ -0.24
Cpne3Q8BT60 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cpne3Q8BT60 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.52□□□□□ -0.24
Cpne3Q8BT60 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.52□□□□□ -0.24
Cpne3Q8BT60 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpne3Q8BT60 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cpne3Q8BT60 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpne3Q8BT60 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpne3Q8BT60 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cpne3Q8BT60 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Gm2810-201ENSMUST00000118681 990 ntBASIC13.52□□□□□ -0.25
Cpne3Q8BT60 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Gm27525-201ENSMUST00000184465 107 ntBASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Gm6443-201ENSMUST00000203599 874 ntBASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Gm45612-201ENSMUST00000211320 160 ntBASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cpne3Q8BT60 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cpne3Q8BT60 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne3Q8BT60 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne3Q8BT60 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne3Q8BT60 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpne3Q8BT60 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms