Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Gm13385-201ENSMUST00000121089 220 ntBASIC14.81□□□□□ -0.04
Rd3Q8BRE0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rd3Q8BRE0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rd3Q8BRE0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Mir1894-201ENSMUST00000122802 81 ntBASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rd3Q8BRE0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms