Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4Q8BQZ5 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4Q8BQZ5 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4Q8BQZ5 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4Q8BQZ5 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4Q8BQZ5 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4Q8BQZ5 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cpsf4Q8BQZ5 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4Q8BQZ5 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cpsf4Q8BQZ5 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cpsf4Q8BQZ5 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Gm15693-201ENSMUST00000120470 637 ntBASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4Q8BQZ5 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Gm27618-201ENSMUST00000183671 60 ntBASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4Q8BQZ5 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cpsf4Q8BQZ5 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Cpsf4Q8BQZ5 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
Cpsf4Q8BQZ5 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Gm10576-201ENSMUST00000191927 825 ntBASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4Q8BQZ5 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms