Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Gm9229-201ENSMUST00000222777 126 ntBASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sfr1Q8BP27 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sfr1Q8BP27 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sfr1Q8BP27 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.27□□□□□ -0.12
Sfr1Q8BP27 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sfr1Q8BP27 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Sfr1Q8BP27 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sfr1Q8BP27 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sfr1Q8BP27 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sfr1Q8BP27 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Sfr1Q8BP27 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.27□□□□□ -0.12
Sfr1Q8BP27 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.27□□□□□ -0.12
Sfr1Q8BP27 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sfr1Q8BP27 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sfr1Q8BP27 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sfr1Q8BP27 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.27□□□□□ -0.12
Sfr1Q8BP27 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
Sfr1Q8BP27 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sfr1Q8BP27 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Gm9063-201ENSMUST00000223299 582 ntBASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Sfr1Q8BP27 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Gm6916-202ENSMUST00000205523 195 ntBASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.26□□□□□ -0.13
Sfr1Q8BP27 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms