Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ush1gQ80T11 Gm4804-201ENSMUST00000182234 999 ntBASIC15.3■□□□□ 0.04
Ush1gQ80T11 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.3■□□□□ 0.04
Ush1gQ80T11 Gm6007-201ENSMUST00000208170 823 ntBASIC15.3■□□□□ 0.04
Ush1gQ80T11 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.3■□□□□ 0.04
Ush1gQ80T11 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.3■□□□□ 0.04
Ush1gQ80T11 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1gQ80T11 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1gQ80T11 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1gQ80T11 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1gQ80T11 Gm9396-201ENSMUST00000076703 567 ntBASIC15.3■□□□□ 0.04
Ush1gQ80T11 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1gQ80T11 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1gQ80T11 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1gQ80T11 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1gQ80T11 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1gQ80T11 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ush1gQ80T11 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ush1gQ80T11 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.29■□□□□ 0.04
Ush1gQ80T11 Gm17794-201ENSMUST00000220252 955 ntBASIC15.29■□□□□ 0.04
Ush1gQ80T11 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.29■□□□□ 0.04
Ush1gQ80T11 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ush1gQ80T11 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1gQ80T11 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Gm27892-201ENSMUST00000185017 106 ntBASIC15.28■□□□□ 0.04
Ush1gQ80T11 Mir7654-201ENSMUST00000185082 70 ntBASIC15.28■□□□□ 0.04
Ush1gQ80T11 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.28■□□□□ 0.04
Ush1gQ80T11 Gm45841-201ENSMUST00000207700 164 ntBASIC15.28■□□□□ 0.04
Ush1gQ80T11 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1gQ80T11 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.28■□□□□ 0.04
Ush1gQ80T11 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ush1gQ80T11 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ush1gQ80T11 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ush1gQ80T11 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Ush1gQ80T11 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ush1gQ80T11 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ush1gQ80T11 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ush1gQ80T11 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.27■□□□□ 0.04
Ush1gQ80T11 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ush1gQ80T11 Gm12742-201ENSMUST00000117326 410 ntBASIC15.27■□□□□ 0.04
Ush1gQ80T11 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.27■□□□□ 0.04
Ush1gQ80T11 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.27■□□□□ 0.04
Ush1gQ80T11 Gm5279-201ENSMUST00000199575 745 ntBASIC15.27■□□□□ 0.04
Ush1gQ80T11 Gm18307-201ENSMUST00000206864 949 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms