Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.95□□□□□ -0.34
Pif1Q80SX8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pif1Q80SX8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Gm4804-201ENSMUST00000182234 999 ntBASIC12.94□□□□□ -0.34
Pif1Q80SX8 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.94□□□□□ -0.34
Pif1Q80SX8 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.94□□□□□ -0.34
Pif1Q80SX8 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pif1Q80SX8 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.94□□□□□ -0.34
Pif1Q80SX8 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Pif1Q80SX8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Gm15957-201ENSMUST00000118893 974 ntBASIC12.93□□□□□ -0.34
Pif1Q80SX8 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.93□□□□□ -0.34
Pif1Q80SX8 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.93□□□□□ -0.34
Pif1Q80SX8 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pif1Q80SX8 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Gm5279-201ENSMUST00000199575 745 ntBASIC12.93□□□□□ -0.34
Pif1Q80SX8 Gm17795-201ENSMUST00000214505 757 ntBASIC12.93□□□□□ -0.34
Pif1Q80SX8 Gm5035-201ENSMUST00000215581 927 ntBASIC12.93□□□□□ -0.34
Pif1Q80SX8 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.93□□□□□ -0.34
Pif1Q80SX8 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Pif1Q80SX8 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pif1Q80SX8 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.93□□□□□ -0.34
Pif1Q80SX8 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.92□□□□□ -0.34
Pif1Q80SX8 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms